This is an overview of the squire package, which is a deterministic model of COVID-19 transmission. The squire model was developed as part of the Imperial College COVID-19 Response Team and has been key in a number of our COVID-19 projects and publications to date, including:
This is a brief overview of the model, which is fully described at https://github.com/mrc-ide/squire
Overview squire is a package enabling users to quickly and easily generate calibrated estimates of SARS-CoV-2 epidemic trajectories under different control scenarios.